A selection of research and engineering projects I've worked on.
An autonomous research agent that plans and executes bioinformatics analyses on spatial and single-cell transcriptomics data, writing and running its own notebook code against a live kernel.
A Gemma-powered genomic copilot that calls AlphaGenome, renders epigenomic tracks, designs genome edits, and fine-tunes the agent locally.
A full-stack web app for interactive video instance segmentation and tracking on Meta's SAM 3, with a downstream pipeline for quantifying animal behavior from tracked masks.
Ensemble statistical learning algorithms for dealing with large amounts of missing data.